Benthic community structure and ecosystem functions in above- and below-waterfall pools in Borneo

This is the final version. Available on open access from Springer Verlag via the DOI in this recordWaterfalls are geomorphic features that often partition streams into discrete zones. Our study examined aquatic communities, litter decomposition and periphyton growth rates for above- and below-waterfall pools in Ulu Temburong National Park, Brunei. We observed higher fish densities in below-waterfall pools (0.24 fish m−2 vs. 0.02 fish m−2 in above-waterfall pools) and higher shrimp abundance in above-waterfall pools (eight shrimp/pool vs. less than one shrimp/pool in below-waterfall pools). However, macroinvertebrate densities (excluding shrimp) were similar among both pool types. Ambient periphyton was higher in below-waterfall pools in 2013 (4.3 vs. 2.8 g m−2 in above-waterfall pools) and 2014 (4.8 vs. 3.4 g m−2 in above-waterfall pools), while periphyton growth rates varied from 0.05 to 0.26 g m−2 days−1 and were significantly higher in below-waterfall pools in 2014. Leaf litter decomposition rates (0.001 to 0.024 days−1) did not differ between pool types, suggesting that neither shrimp nor fish densities had consistent impacts on this ecosystem function. Regardless, this research demonstrates the varied effects of biotic and abiotic factors on community structure and ecosystem function. Our results have highlighted the importance of discontinuities, such as waterfalls, in tropical streams.Natural Environment Research Council (NERC

Fluvial biotopes influence macroinvertebrate biodiversity in South-East Asian tropical streams

This is the final version. Available from Ecological Society of America via the DOI in this record.Given the widespread degradation of aquatic systems caused by land‐use changes associated with palm oil production in South‐East Asia, it is imperative to identify and study the remaining undisturbed rivers and streams. Stream macroinvertebrates are reliable indicators of environmental health. Linking the community structure of these organisms to natural hydraulic and geomorphic conditions (categorized as biotopes) is vital for the conservation and restoration of streams. This study characterizes the effects of biotopes on macroinvertebrate community structure in three streams within Ulu Temburong National Park in northern Borneo. Biotopes within these streams were categorized as either bedrock (waterfalls and cascades) or mixed substrate (riffles and pools). In total, 119 taxa were collected from all sampled biotopes, but not all taxa were collected from each stream. Biotopes were statistically distinct in terms of taxonomic richness, but not mean individual density or average community biomass. There were differences in community structure between waterfalls, cascades, pools, and riffles. The survey suggests that pool and riffle biotopes were more vulnerable to scouring flows and had similar community structure, while waterfalls and cascades likely experienced lower sheer stress during floods and had similar macroinvertebrate communities. This study has found that classification and mapping of macroinvertebrates with biotope theory in pristine, tropical streams is a useful framework for simplifying the many linkages between ecology, geomorphology, and hydrology. These natural patterns increase our understanding of tropical streams and can be used to assess the impacts of forest degradation.Natural Environment Research Council‐funded PhD Studentshi

Accidental Occupational Exposures among Dental Healthcare Workers in Asir Region, Saudi Arabia

Aims and objectives: This study aims to assess the prevalence of accidental occupational injuries among dental healthcare workers in Asir region, Saudi Arabia, and thus the risk involved. Materials and methods: Self-administered questionnaires were distributed among dental specialists, general dental practitioners, dental interns, hygienists and dental assistants working in dental college (College of Dentistry, King Khalid University, Abha, KSA). Dentists working in private clinics and government hospitals in Asir Province, Saudi Arabia, were also included in this study. Results: Of the total 300 questionnaires, 190 were returned with a response rate of 63.3%. Of the respondents, 138 (72.63%) were males and the rest 52 (27.3%) were females. The response rate in this study was 63.3%. The total number of occupational injuries among DHCWs was 138 (72.5%) with a density rate of 0.72 per 100 persons per year which is significantly high. In the present study, a higher incidence of injuries occurred in the dental operatory and most of them being from needlestick injuries, i.e. 78 (56.2%). Conclusion: (1) Accidental occupational exposure incidence rate among DHCWs in Asir region, Saudi Arabia, is high as compared to other studies, (2) the majority of the injuriesoccurred in the dental operatory. Most of these injuries were caused by syringe needles and involved the finger or thumb.&nbsp

Lentiviral Engineered Fibroblasts Expressing Codon Optimized COL7A1 Restore Anchoring Fibrils in RDEB

Cells therapies, engineered to secrete replacement proteins, are being developed to ameliorate otherwise debilitating diseases. Recessive dystrophic epidermolysis bullosa (RDEB) is caused by defects of type VII collagen (C7), a protein essential for anchoring fibril formation at the dermal-epidermal junction (DEJ). Whilst allogeneic fibroblasts injected directly into the dermis can mediate transient disease modulation, autologous gene-modified fibroblasts should evade immunological rejection and support sustained delivery of C7 at the DEJ. We demonstrate the feasibility of such an approach using a therapeutic grade, self-inactivating-lentiviral vector, encoding codon optimized COL7A1, to transduce RDEB fibroblasts under conditions suitable for clinical application. Expression and secretion of C7 was confirmed, with transduced cells exhibiting supra-normal levels of protein expression and ex vivo migration of fibroblasts was restored in functional assays. Gene modified RDEB fibroblasts also deposited C7 at the DEJ of human RDEB skin xenografts placed on NOD-scid IL2Rgamma(null) recipients, with reconstruction of human epidermal structure and regeneration of anchoring fibrils at the DEJ. Fibroblast mediated restoration of protein and structural defects in this RDEB model strongly supports proposed therapeutic applications in man

Application of Box-Behnken Design for Ultrasound- Assisted Extraction and Recycling Preparative HPLC for Isolation of Anthraquinones from Cassia singueana

Introduction – Cassia singueana Del. (Fabaceae) is a rare medicinal plant used in the traditional medicine preparations to treat various ailments. The root of C. singueana is a rich source of anthraquinones that possess anticancer, antibacterial and antifungal properties. Objective – The objective of this study was to develop ultrasound-assisted extraction (UAE) method for achieving a high extraction yield of anthraquinones using the response surface methodology (RSM), Box-Behnken Design (BBD), and a recycling preparative HPLC protocol for isolation of anthraquinones from C. singueana. Methodology – Optimisation of UAE was performed using the Box-Behnken experimental design. Recycling preparative HPLC was employed to isolate anthraquinones from the root extract of C. singueana. Results - The BBD was well-described by a quadratic polynomial model (R2 = 0.9751). The predicted optimal UAE conditions for a high extraction yield were obtained at: extraction time 25.00 min, temperature 50C and solvent-sample ratio of 10 mL/g. Under the predicted conditions, the experimental value (1.65 ± 0.07%) closely agreed to the predicted yield (1.64%). The obtained crude extract of C. singueana root was subsequently purified to afford eight anthraquinones. Conclusion - The extraction protocol described here is suitable for large-scale extraction of anthraquinones from plant extracts

Capsule Endoscopy: A Valuable Tool in the Follow-Up of People With Celiac Disease on a Gluten-Free Diet

OBJECTIVES: Traditional celiac disease guidelines recommend follow-up endoscopy and duodenal biopsies at 6–12 months after commencing a gluten-free diet (GFD). However, histology may remain abnormal even 1–2 years later. We evaluated the role of capsule endoscopy in patients with celiac disease after treatment with a GFD. METHODS: Twelve adult patients with newly diagnosed celiac disease were prospectively enrolled. All patients had baseline symptom assessment, celiac serology (tissue transglutaminase antibody, tTG), and capsule endoscopy. Twelve months after commencing a GFD, patients underwent repeat symptom assessment, celiac serology, upper gastrointestinal endoscopy, and capsule endoscopy. RESULTS: At baseline, capsule endoscopy detected endoscopic markers of villous atrophy in the duodenum and extending to a variable distance along the small intestine. On the basis of small bowel transit time, the mean±s.e.m. percentage of small intestine with villous atrophy was 18.2±3.7%. After 12 months on a GFD, repeat capsule endoscopy demonstrated mucosal healing from a distal to proximal direction, and the percentage of small intestine with villous atrophy was significantly reduced to 3.4±1.2% (P¼0.0014) and this correlated with improvement in the symptom score (correlation 0.69, P¼0.01). There was a significant improvement in symptom score (5.2±1.0 vs. 1.7±0.4, P¼0.0012) and reduction in immunoglobulin A–tTG levels (81.5±10.6 vs. 17.5±8.2, P¼0.0005). However, 42% of subjects demonstrated persistent villous abnormality as assessed by duodenal histology. CONCLUSIONS: After 12 months on a GFD, patients with celiac disease demonstrate an improvement in symptoms, celiac serology, and the extent of disease as measured by capsule endoscopy. Mucosal healing occurs in a distal to proximal direction. The extent of mucosal healing correlates with improvement in symptoms. Duodenal histology does not reflect the healing that has occurred more distally.Ilmars Lidums, Edward Teo, John Field and Adrian G. Cummin